mcp-opentargets
Open Targets MCP — disease/target/drug knowledge graph.
Part of Pipeworx — an MCP gateway connecting AI agents to 673+ live data sources.
Tools
| Tool | Description |
|---|---|
target |
Target (gene) profile by Ensembl id. |
disease |
Disease profile by EFO id. |
drug |
Drug profile by ChEMBL id. |
search |
Platform search across diseases/targets/drugs. |
target_associations |
Top disease associations for a target. |
disease_associations |
Top target associations for a disease. |
target_known_drugs |
Drugs clinically tested against a target. |
Quick Start
Add to your MCP client (Claude Desktop, Cursor, Windsurf, etc.):
{
"mcpServers": {
"opentargets": {
"url": "https://gateway.pipeworx.io/opentargets/mcp"
}
}
}
Or connect to the full Pipeworx gateway for access to all 673+ data sources:
{
"mcpServers": {
"pipeworx": {
"url": "https://gateway.pipeworx.io/mcp"
}
}
}
Using with ask_pipeworx
Instead of calling tools directly, you can ask questions in plain English:
ask_pipeworx({ question: "your question about Opentargets data" })
The gateway picks the right tool and fills the arguments automatically.
More
License
MIT
